Protein–RNA interactions for Protein: Q7TMX5

Shq1, Protein SHQ1 homolog, mousemouse

Predictions only

Length 569 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shq1Q7TMX5 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shq1Q7TMX5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shq1Q7TMX5 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shq1Q7TMX5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shq1Q7TMX5 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC21.28■■□□□ 1
Shq1Q7TMX5 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC21.28■■□□□ 1
Shq1Q7TMX5 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
Shq1Q7TMX5 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC21.28■■□□□ 1
Shq1Q7TMX5 Gm5745-201ENSMUST00000183748 313 ntBASIC21.28■■□□□ 1
Shq1Q7TMX5 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC21.28■■□□□ 1
Shq1Q7TMX5 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC21.28■■□□□ 1
Shq1Q7TMX5 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC21.28■■□□□ 1
Shq1Q7TMX5 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC21.28■■□□□ 1
Shq1Q7TMX5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Shq1Q7TMX5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shq1Q7TMX5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Shq1Q7TMX5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC21.28■■□□□ 1
Shq1Q7TMX5 Shroom3-211ENSMUST00000225438 5742 ntBASIC21.28■■□□□ 1
Shq1Q7TMX5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Shq1Q7TMX5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Shq1Q7TMX5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC21.28■■□□□ 1
Shq1Q7TMX5 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Shq1Q7TMX5 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shq1Q7TMX5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shq1Q7TMX5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Shq1Q7TMX5 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC21.27■■□□□ 1
Shq1Q7TMX5 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Shq1Q7TMX5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC21.27■■□□□ 1
Shq1Q7TMX5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC21.27■■□□□ 1
Shq1Q7TMX5 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC21.27■■□□□ 1
Shq1Q7TMX5 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC21.27■■□□□ 1
Shq1Q7TMX5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Shq1Q7TMX5 Gm27437-201ENSMUST00000183429 107 ntBASIC21.27■■□□□ 1
Shq1Q7TMX5 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shq1Q7TMX5 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shq1Q7TMX5 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shq1Q7TMX5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Shq1Q7TMX5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Shq1Q7TMX5 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shq1Q7TMX5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shq1Q7TMX5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shq1Q7TMX5 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shq1Q7TMX5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shq1Q7TMX5 Gm6415-201ENSMUST00000118488 348 ntBASIC21.26■□□□□ 0.99
Shq1Q7TMX5 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Shq1Q7TMX5 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC21.26■□□□□ 0.99
Shq1Q7TMX5 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC21.26■□□□□ 0.99
Shq1Q7TMX5 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shq1Q7TMX5 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Shq1Q7TMX5 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shq1Q7TMX5 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shq1Q7TMX5 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Gm2810-201ENSMUST00000118681 990 ntBASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Gm23547-201ENSMUST00000158210 271 ntBASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shq1Q7TMX5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Shq1Q7TMX5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shq1Q7TMX5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC21.24■□□□□ 0.99
Shq1Q7TMX5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shq1Q7TMX5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC21.24■□□□□ 0.99
Shq1Q7TMX5 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Shq1Q7TMX5 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Shq1Q7TMX5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC21.24■□□□□ 0.99
Shq1Q7TMX5 Gm16026-204ENSMUST00000162652 683 ntBASIC21.24■□□□□ 0.99
Shq1Q7TMX5 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shq1Q7TMX5 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shq1Q7TMX5 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shq1Q7TMX5 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC21.24■□□□□ 0.99
Shq1Q7TMX5 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shq1Q7TMX5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shq1Q7TMX5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Shq1Q7TMX5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Shq1Q7TMX5 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Shq1Q7TMX5 Gm9954-202ENSMUST00000198686 4725 ntBASIC21.23■□□□□ 0.99
Shq1Q7TMX5 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Shq1Q7TMX5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shq1Q7TMX5 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Shq1Q7TMX5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Shq1Q7TMX5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Shq1Q7TMX5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shq1Q7TMX5 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms