Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vma21Q78T54 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Vma21Q78T54 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.64□□□□□ -0.39
Vma21Q78T54 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vma21Q78T54 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Vma21Q78T54 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vma21Q78T54 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Vma21Q78T54 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vma21Q78T54 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vma21Q78T54 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.63□□□□□ -0.39
Vma21Q78T54 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.63□□□□□ -0.39
Vma21Q78T54 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Vma21Q78T54 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.63□□□□□ -0.39
Vma21Q78T54 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Vma21Q78T54 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vma21Q78T54 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vma21Q78T54 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.63□□□□□ -0.39
Vma21Q78T54 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.62□□□□□ -0.39
Vma21Q78T54 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vma21Q78T54 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.62□□□□□ -0.39
Vma21Q78T54 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Vma21Q78T54 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vma21Q78T54 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vma21Q78T54 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vma21Q78T54 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vma21Q78T54 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vma21Q78T54 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vma21Q78T54 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vma21Q78T54 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Vma21Q78T54 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vma21Q78T54 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vma21Q78T54 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vma21Q78T54 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vma21Q78T54 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vma21Q78T54 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Vma21Q78T54 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vma21Q78T54 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.61□□□□□ -0.39
Vma21Q78T54 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vma21Q78T54 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.61□□□□□ -0.39
Vma21Q78T54 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vma21Q78T54 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vma21Q78T54 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vma21Q78T54 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vma21Q78T54 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms