Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx58Q6Q899 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ddx58Q6Q899 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx58Q6Q899 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx58Q6Q899 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx58Q6Q899 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.11■□□□□ 0.65
Ddx58Q6Q899 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx58Q6Q899 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx58Q6Q899 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx58Q6Q899 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx58Q6Q899 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.11■□□□□ 0.65
Ddx58Q6Q899 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Gm15427-201ENSMUST00000117288 531 ntBASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx58Q6Q899 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx58Q6Q899 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx58Q6Q899 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC19.09■□□□□ 0.65
Ddx58Q6Q899 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Ddx58Q6Q899 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.09■□□□□ 0.65
Ddx58Q6Q899 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx58Q6Q899 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx58Q6Q899 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx58Q6Q899 Gm7556-201ENSMUST00000201178 1084 ntBASIC19.09■□□□□ 0.65
Ddx58Q6Q899 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.09■□□□□ 0.65
Ddx58Q6Q899 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC19.09■□□□□ 0.65
Ddx58Q6Q899 Chchd1-203ENSMUST00000224633 557 ntBASIC19.09■□□□□ 0.65
Ddx58Q6Q899 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx58Q6Q899 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx58Q6Q899 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx58Q6Q899 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx58Q6Q899 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx58Q6Q899 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx58Q6Q899 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx58Q6Q899 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx58Q6Q899 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx58Q6Q899 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx58Q6Q899 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx58Q6Q899 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Ddx58Q6Q899 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx58Q6Q899 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.08■□□□□ 0.64
Ddx58Q6Q899 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Ddx58Q6Q899 Gm26308-201ENSMUST00000157768 69 ntBASIC19.08■□□□□ 0.64
Ddx58Q6Q899 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC19.08■□□□□ 0.64
Ddx58Q6Q899 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx58Q6Q899 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx58Q6Q899 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx58Q6Q899 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx58Q6Q899 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx58Q6Q899 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx58Q6Q899 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx58Q6Q899 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx58Q6Q899 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ddx58Q6Q899 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ddx58Q6Q899 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.07■□□□□ 0.64
Ddx58Q6Q899 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC19.07■□□□□ 0.64
Ddx58Q6Q899 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx58Q6Q899 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx58Q6Q899 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx58Q6Q899 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ddx58Q6Q899 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx58Q6Q899 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx58Q6Q899 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx58Q6Q899 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx58Q6Q899 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx58Q6Q899 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx58Q6Q899 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ddx58Q6Q899 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Ddx58Q6Q899 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.06■□□□□ 0.64
Ddx58Q6Q899 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Ddx58Q6Q899 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ddx58Q6Q899 AC124549.3-201ENSMUST00000225541 367 ntBASIC19.06■□□□□ 0.64
Ddx58Q6Q899 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.06■□□□□ 0.64
Ddx58Q6Q899 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx58Q6Q899 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx58Q6Q899 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx58Q6Q899 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms