Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf220Q6PDX6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf220Q6PDX6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Gm29257-201ENSMUST00000186115 639 ntBASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf220Q6PDX6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rnf220Q6PDX6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.71□□□□□ -0.06
Rnf220Q6PDX6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Rnf220Q6PDX6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rnf220Q6PDX6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rnf220Q6PDX6 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
Rnf220Q6PDX6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 Gm8520-201ENSMUST00000186517 868 ntBASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Rnf220Q6PDX6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf220Q6PDX6 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms