Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.06■□□□□ 0.48
Smarcc2Q6PDG5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Smarcc2Q6PDG5 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.06■□□□□ 0.48
Smarcc2Q6PDG5 Gm18622-201ENSMUST00000219361 595 ntBASIC18.06■□□□□ 0.48
Smarcc2Q6PDG5 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.06■□□□□ 0.48
Smarcc2Q6PDG5 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcc2Q6PDG5 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcc2Q6PDG5 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcc2Q6PDG5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.06■□□□□ 0.48
Smarcc2Q6PDG5 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcc2Q6PDG5 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcc2Q6PDG5 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcc2Q6PDG5 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Gm7862-201ENSMUST00000121461 292 ntBASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Gm4535-201ENSMUST00000182274 558 ntBASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Gm10355-201ENSMUST00000097146 517 ntBASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcc2Q6PDG5 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcc2Q6PDG5 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcc2Q6PDG5 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.04■□□□□ 0.48
Smarcc2Q6PDG5 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.04■□□□□ 0.48
Smarcc2Q6PDG5 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcc2Q6PDG5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcc2Q6PDG5 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcc2Q6PDG5 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.04■□□□□ 0.48
Smarcc2Q6PDG5 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Smarcc2Q6PDG5 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcc2Q6PDG5 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcc2Q6PDG5 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcc2Q6PDG5 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcc2Q6PDG5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcc2Q6PDG5 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcc2Q6PDG5 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Gm13418-201ENSMUST00000119097 944 ntBASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Smarcc2Q6PDG5 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcc2Q6PDG5 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.02■□□□□ 0.48
Smarcc2Q6PDG5 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcc2Q6PDG5 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcc2Q6PDG5 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcc2Q6PDG5 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcc2Q6PDG5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcc2Q6PDG5 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcc2Q6PDG5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.02■□□□□ 0.48
Smarcc2Q6PDG5 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.02■□□□□ 0.48
Smarcc2Q6PDG5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcc2Q6PDG5 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.02■□□□□ 0.48
Smarcc2Q6PDG5 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcc2Q6PDG5 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcc2Q6PDG5 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.02■□□□□ 0.48
Smarcc2Q6PDG5 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Smarcc2Q6PDG5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcc2Q6PDG5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.02■□□□□ 0.48
Smarcc2Q6PDG5 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Smarcc2Q6PDG5 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.02■□□□□ 0.47
Smarcc2Q6PDG5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Smarcc2Q6PDG5 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.02■□□□□ 0.47
Smarcc2Q6PDG5 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms