Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim37Q6PCX9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim37Q6PCX9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trim37Q6PCX9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim37Q6PCX9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim37Q6PCX9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim37Q6PCX9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.17■□□□□ 0.34
Trim37Q6PCX9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim37Q6PCX9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim37Q6PCX9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim37Q6PCX9 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.17■□□□□ 0.34
Trim37Q6PCX9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim37Q6PCX9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trim37Q6PCX9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim37Q6PCX9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trim37Q6PCX9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim37Q6PCX9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim37Q6PCX9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim37Q6PCX9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim37Q6PCX9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim37Q6PCX9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim37Q6PCX9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim37Q6PCX9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.15■□□□□ 0.34
Trim37Q6PCX9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim37Q6PCX9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim37Q6PCX9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim37Q6PCX9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim37Q6PCX9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim37Q6PCX9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim37Q6PCX9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim37Q6PCX9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms