Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Gm11780-201ENSMUST00000136880 516 ntBASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Gm13418-201ENSMUST00000119097 944 ntBASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Gm6296-201ENSMUST00000222599 943 ntBASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Herc4Q6PAV2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Gm15358-201ENSMUST00000119249 520 ntBASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.1■□□□□ 0.33
Herc4Q6PAV2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.1■□□□□ 0.33
Herc4Q6PAV2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herc4Q6PAV2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Herc4Q6PAV2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Herc4Q6PAV2 Gm6376-201ENSMUST00000209407 580 ntBASIC17.09■□□□□ 0.33
Herc4Q6PAV2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Herc4Q6PAV2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Herc4Q6PAV2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Herc4Q6PAV2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Herc4Q6PAV2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Herc4Q6PAV2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Herc4Q6PAV2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Herc4Q6PAV2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Herc4Q6PAV2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Herc4Q6PAV2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Herc4Q6PAV2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Herc4Q6PAV2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Herc4Q6PAV2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Herc4Q6PAV2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Herc4Q6PAV2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Herc4Q6PAV2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Herc4Q6PAV2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Herc4Q6PAV2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Herc4Q6PAV2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Herc4Q6PAV2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Herc4Q6PAV2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Herc4Q6PAV2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.08■□□□□ 0.32
Herc4Q6PAV2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
Herc4Q6PAV2 Gm27646-201ENSMUST00000183989 110 ntBASIC17.08■□□□□ 0.32
Herc4Q6PAV2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms