Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Six2Q62232 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.5■□□□□ 0.23
Six2Q62232 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Six2Q62232 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.5■□□□□ 0.23
Six2Q62232 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Birc2-201ENSMUST00000054878 378 ntBASIC16.5■□□□□ 0.23
Six2Q62232 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Six2Q62232 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.5■□□□□ 0.23
Six2Q62232 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.5■□□□□ 0.23
Six2Q62232 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six2Q62232 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Six2Q62232 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six2Q62232 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six2Q62232 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.49■□□□□ 0.23
Six2Q62232 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six2Q62232 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Six2Q62232 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six2Q62232 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six2Q62232 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Six2Q62232 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Six2Q62232 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.49■□□□□ 0.23
Six2Q62232 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Six2Q62232 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six2Q62232 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.49■□□□□ 0.23
Six2Q62232 Gm8318-201ENSMUST00000182954 872 ntBASIC16.49■□□□□ 0.23
Six2Q62232 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.49■□□□□ 0.23
Six2Q62232 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Six2Q62232 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six2Q62232 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Six2Q62232 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Six2Q62232 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.49■□□□□ 0.23
Six2Q62232 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six2Q62232 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six2Q62232 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Six2Q62232 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Six2Q62232 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six2Q62232 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six2Q62232 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Six2Q62232 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six2Q62232 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six2Q62232 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Six2Q62232 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six2Q62232 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.48■□□□□ 0.23
Six2Q62232 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six2Q62232 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six2Q62232 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six2Q62232 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.48■□□□□ 0.23
Six2Q62232 Gm13418-201ENSMUST00000119097 944 ntBASIC16.48■□□□□ 0.23
Six2Q62232 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six2Q62232 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six2Q62232 Gm4535-201ENSMUST00000182274 558 ntBASIC16.48■□□□□ 0.23
Six2Q62232 Gm27459-201ENSMUST00000184860 107 ntBASIC16.48■□□□□ 0.23
Six2Q62232 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.48■□□□□ 0.23
Six2Q62232 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.48■□□□□ 0.23
Six2Q62232 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six2Q62232 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six2Q62232 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six2Q62232 Gm10355-201ENSMUST00000097146 517 ntBASIC16.48■□□□□ 0.23
Six2Q62232 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six2Q62232 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six2Q62232 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Six2Q62232 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six2Q62232 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Six2Q62232 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six2Q62232 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six2Q62232 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Six2Q62232 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Six2Q62232 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Six2Q62232 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six2Q62232 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Six2Q62232 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Six2Q62232 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six2Q62232 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Six2Q62232 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six2Q62232 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Six2Q62232 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six2Q62232 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.47■□□□□ 0.23
Six2Q62232 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Six2Q62232 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six2Q62232 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six2Q62232 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six2Q62232 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six2Q62232 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms