Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Foxc1Q61572 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Foxc1Q61572 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Foxc1Q61572 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.4□□□□□ -0.58
Foxc1Q61572 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.4□□□□□ -0.58
Foxc1Q61572 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Foxc1Q61572 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Foxc1Q61572 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Foxc1Q61572 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.4□□□□□ -0.58
Foxc1Q61572 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.4□□□□□ -0.58
Foxc1Q61572 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.4□□□□□ -0.58
Foxc1Q61572 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Foxc1Q61572 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.4□□□□□ -0.58
Foxc1Q61572 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Foxc1Q61572 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Foxc1Q61572 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Foxc1Q61572 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Foxc1Q61572 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Foxc1Q61572 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
Foxc1Q61572 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Foxc1Q61572 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Foxc1Q61572 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.4□□□□□ -0.59
Foxc1Q61572 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.59
Foxc1Q61572 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Foxc1Q61572 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.39□□□□□ -0.59
Foxc1Q61572 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.39□□□□□ -0.59
Foxc1Q61572 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.39□□□□□ -0.59
Foxc1Q61572 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.39□□□□□ -0.59
Foxc1Q61572 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.39□□□□□ -0.59
Foxc1Q61572 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Foxc1Q61572 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.39□□□□□ -0.59
Foxc1Q61572 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.39□□□□□ -0.59
Foxc1Q61572 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.39□□□□□ -0.59
Foxc1Q61572 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Foxc1Q61572 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Foxc1Q61572 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms