Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift88Q61371 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ift88Q61371 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.16■□□□□ 0.34
Ift88Q61371 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ift88Q61371 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ift88Q61371 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ift88Q61371 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ift88Q61371 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Ift88Q61371 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ift88Q61371 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ift88Q61371 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ift88Q61371 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ift88Q61371 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
Ift88Q61371 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ift88Q61371 Gm10231-201ENSMUST00000181584 441 ntBASIC17.15■□□□□ 0.34
Ift88Q61371 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ift88Q61371 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.15■□□□□ 0.34
Ift88Q61371 Gm10175-202ENSMUST00000208752 441 ntBASIC17.15■□□□□ 0.34
Ift88Q61371 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ift88Q61371 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ift88Q61371 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ift88Q61371 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ift88Q61371 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ift88Q61371 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ift88Q61371 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
Ift88Q61371 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Ift88Q61371 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.15■□□□□ 0.34
Ift88Q61371 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.15■□□□□ 0.34
Ift88Q61371 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Ift88Q61371 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ift88Q61371 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ift88Q61371 Gm15794-201ENSMUST00000120182 631 ntBASIC17.14■□□□□ 0.33
Ift88Q61371 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ift88Q61371 Gm17808-201ENSMUST00000200859 894 ntBASIC17.14■□□□□ 0.33
Ift88Q61371 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ift88Q61371 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Ift88Q61371 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ift88Q61371 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ift88Q61371 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ift88Q61371 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ift88Q61371 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ift88Q61371 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ift88Q61371 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Ift88Q61371 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ift88Q61371 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ift88Q61371 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ift88Q61371 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ift88Q61371 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.13■□□□□ 0.33
Ift88Q61371 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Ift88Q61371 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.13■□□□□ 0.33
Ift88Q61371 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Ift88Q61371 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.13■□□□□ 0.33
Ift88Q61371 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
Ift88Q61371 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ift88Q61371 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ift88Q61371 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ift88Q61371 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.12■□□□□ 0.33
Ift88Q61371 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.12■□□□□ 0.33
Ift88Q61371 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Ift88Q61371 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.12■□□□□ 0.33
Ift88Q61371 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.12■□□□□ 0.33
Ift88Q61371 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.12■□□□□ 0.33
Ift88Q61371 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ift88Q61371 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.12■□□□□ 0.33
Ift88Q61371 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.12■□□□□ 0.33
Ift88Q61371 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.12■□□□□ 0.33
Ift88Q61371 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ift88Q61371 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms