Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cln3Q61124 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cln3Q61124 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cln3Q61124 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cln3Q61124 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln3Q61124 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln3Q61124 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln3Q61124 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln3Q61124 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cln3Q61124 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Cln3Q61124 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Cln3Q61124 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cln3Q61124 Gm25287-201ENSMUST00000103846 110 ntBASIC16.91■□□□□ 0.3
Cln3Q61124 Gm22918-201ENSMUST00000103855 110 ntBASIC16.91■□□□□ 0.3
Cln3Q61124 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln3Q61124 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cln3Q61124 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln3Q61124 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.91■□□□□ 0.3
Cln3Q61124 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.91■□□□□ 0.3
Cln3Q61124 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.91■□□□□ 0.3
Cln3Q61124 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cln3Q61124 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cln3Q61124 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.91■□□□□ 0.3
Cln3Q61124 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln3Q61124 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln3Q61124 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln3Q61124 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cln3Q61124 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cln3Q61124 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln3Q61124 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln3Q61124 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cln3Q61124 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cln3Q61124 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cln3Q61124 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Cln3Q61124 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cln3Q61124 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cln3Q61124 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cln3Q61124 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cln3Q61124 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cln3Q61124 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cln3Q61124 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Cln3Q61124 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cln3Q61124 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cln3Q61124 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cln3Q61124 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.9■□□□□ 0.3
Cln3Q61124 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cln3Q61124 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cln3Q61124 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cln3Q61124 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cln3Q61124 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cln3Q61124 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cln3Q61124 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cln3Q61124 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cln3Q61124 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cln3Q61124 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cln3Q61124 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.9■□□□□ 0.3
Cln3Q61124 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Cln3Q61124 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Cln3Q61124 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.89■□□□□ 0.29
Cln3Q61124 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.89■□□□□ 0.29
Cln3Q61124 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.89■□□□□ 0.29
Cln3Q61124 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.89■□□□□ 0.29
Cln3Q61124 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.89■□□□□ 0.29
Cln3Q61124 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cln3Q61124 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.89■□□□□ 0.29
Cln3Q61124 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cln3Q61124 Gm27430-201ENSMUST00000184585 107 ntBASIC16.89■□□□□ 0.29
Cln3Q61124 Gm44333-201ENSMUST00000197168 107 ntBASIC16.89■□□□□ 0.29
Cln3Q61124 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cln3Q61124 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.89■□□□□ 0.29
Cln3Q61124 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.89■□□□□ 0.29
Cln3Q61124 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cln3Q61124 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cln3Q61124 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cln3Q61124 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cln3Q61124 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cln3Q61124 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.89■□□□□ 0.29
Cln3Q61124 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cln3Q61124 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cln3Q61124 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln3Q61124 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln3Q61124 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln3Q61124 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cln3Q61124 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln3Q61124 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cln3Q61124 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cln3Q61124 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln3Q61124 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln3Q61124 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.88■□□□□ 0.29
Cln3Q61124 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.88■□□□□ 0.29
Cln3Q61124 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.88■□□□□ 0.29
Cln3Q61124 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.88■□□□□ 0.29
Cln3Q61124 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln3Q61124 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln3Q61124 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.88■□□□□ 0.29
Cln3Q61124 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln3Q61124 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln3Q61124 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln3Q61124 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cln3Q61124 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms