Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.87□□□□□ -0.03
ClpbQ60649 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
ClpbQ60649 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.87□□□□□ -0.03
ClpbQ60649 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.86□□□□□ -0.03
ClpbQ60649 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.86□□□□□ -0.03
ClpbQ60649 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
ClpbQ60649 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpbQ60649 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpbQ60649 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClpbQ60649 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.86□□□□□ -0.03
ClpbQ60649 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpbQ60649 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpbQ60649 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpbQ60649 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpbQ60649 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.86□□□□□ -0.03
ClpbQ60649 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClpbQ60649 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClpbQ60649 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.86□□□□□ -0.03
ClpbQ60649 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ClpbQ60649 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpbQ60649 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.86□□□□□ -0.03
ClpbQ60649 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpbQ60649 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpbQ60649 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpbQ60649 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpbQ60649 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpbQ60649 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpbQ60649 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpbQ60649 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.86□□□□□ -0.03
ClpbQ60649 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClpbQ60649 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClpbQ60649 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.85□□□□□ -0.03
ClpbQ60649 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
ClpbQ60649 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.85□□□□□ -0.03
ClpbQ60649 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.85□□□□□ -0.03
ClpbQ60649 Gm4459-201ENSMUST00000118750 468 ntBASIC14.85□□□□□ -0.03
ClpbQ60649 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 Gm44357-201ENSMUST00000195897 142 ntBASIC14.85□□□□□ -0.03
ClpbQ60649 Gm19658-201ENSMUST00000196231 138 ntBASIC14.85□□□□□ -0.03
ClpbQ60649 Gm44367-201ENSMUST00000196836 138 ntBASIC14.85□□□□□ -0.03
ClpbQ60649 Gm44350-201ENSMUST00000197197 138 ntBASIC14.85□□□□□ -0.03
ClpbQ60649 Gm44390-201ENSMUST00000197533 144 ntBASIC14.85□□□□□ -0.03
ClpbQ60649 Gm44313-201ENSMUST00000198018 138 ntBASIC14.85□□□□□ -0.03
ClpbQ60649 Gm44486-201ENSMUST00000198508 138 ntBASIC14.85□□□□□ -0.03
ClpbQ60649 Gm44314-201ENSMUST00000199263 138 ntBASIC14.85□□□□□ -0.03
ClpbQ60649 Gm44394-201ENSMUST00000199558 138 ntBASIC14.85□□□□□ -0.03
ClpbQ60649 Gm44484-201ENSMUST00000199873 138 ntBASIC14.85□□□□□ -0.03
ClpbQ60649 Gm44466-201ENSMUST00000200264 138 ntBASIC14.85□□□□□ -0.03
ClpbQ60649 Gm44359-201ENSMUST00000200671 138 ntBASIC14.85□□□□□ -0.03
ClpbQ60649 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.85□□□□□ -0.03
ClpbQ60649 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.85□□□□□ -0.03
ClpbQ60649 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.85□□□□□ -0.03
ClpbQ60649 Gm6296-201ENSMUST00000222599 943 ntBASIC14.85□□□□□ -0.03
ClpbQ60649 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ClpbQ60649 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.85□□□□□ -0.03
ClpbQ60649 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClpbQ60649 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ClpbQ60649 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
ClpbQ60649 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ClpbQ60649 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ClpbQ60649 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
ClpbQ60649 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ClpbQ60649 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.84□□□□□ -0.03
ClpbQ60649 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms