Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Gm45167-201ENSMUST00000208007 322 ntBASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Gm19164-201ENSMUST00000210667 640 ntBASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.47■□□□□ 0.23
Shroom1Q5SX79 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Gm14822-201ENSMUST00000122247 291 ntBASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Gm18489-201ENSMUST00000172565 551 ntBASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Shroom1Q5SX79 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
Shroom1Q5SX79 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Shroom1Q5SX79 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Shroom1Q5SX79 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Shroom1Q5SX79 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Shroom1Q5SX79 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Shroom1Q5SX79 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Gm4899-201ENSMUST00000178708 719 ntBASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shroom1Q5SX79 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shroom1Q5SX79 App-207ENSMUST00000227737 2827 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms