Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Gm11779-201ENSMUST00000118541 368 ntBASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Vps54Q5SPW0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps54Q5SPW0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
Vps54Q5SPW0 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.55■□□□□ 0.56
Vps54Q5SPW0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps54Q5SPW0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps54Q5SPW0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Vps54Q5SPW0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.55■□□□□ 0.56
Vps54Q5SPW0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
Vps54Q5SPW0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.55■□□□□ 0.56
Vps54Q5SPW0 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.55■□□□□ 0.56
Vps54Q5SPW0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps54Q5SPW0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vps54Q5SPW0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps54Q5SPW0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Vps54Q5SPW0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Vps54Q5SPW0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vps54Q5SPW0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Gm7787-201ENSMUST00000216858 688 ntBASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps54Q5SPW0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Gm12260-201ENSMUST00000122447 411 ntBASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vps54Q5SPW0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms