Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-2Q5R1I4 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.56□□□□□ -0.24
Trav6-2Q5R1I4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Rprl2-201ENSMUST00000157150 290 ntBASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Gm5312-201ENSMUST00000203728 547 ntBASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-2Q5R1I4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Gm13365-201ENSMUST00000121188 973 ntBASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Gm44335-201ENSMUST00000196879 141 ntBASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Gm44297-201ENSMUST00000198304 141 ntBASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Gm44346-201ENSMUST00000198851 141 ntBASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-2Q5R1I4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms