Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5d-4Q5R1F6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Gm17807-201ENSMUST00000186869 298 ntBASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5d-4Q5R1F6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav5d-4Q5R1F6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.33□□□□□ -0.27
Trav5d-4Q5R1F6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.33□□□□□ -0.27
Trav5d-4Q5R1F6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5d-4Q5R1F6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms