Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Gm23634-201ENSMUST00000175071 91 ntBASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-3Q5R1E6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 AA414768-201ENSMUST00000121924 1257 ntBASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-3Q5R1E6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Gm19164-201ENSMUST00000210667 640 ntBASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-3Q5R1E6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms