Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Gm20553-201ENSMUST00000204205 844 ntBASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf43Q5NCP0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Rprl2-201ENSMUST00000157150 290 ntBASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Gm18889-201ENSMUST00000174284 929 ntBASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Gm27321-201ENSMUST00000185021 205 ntBASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf43Q5NCP0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Mir7023-201ENSMUST00000185093 64 ntBASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Gm43474-201ENSMUST00000196415 774 ntBASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf43Q5NCP0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf43Q5NCP0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms