Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trim80Q3V061 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim80Q3V061 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim80Q3V061 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trim80Q3V061 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.05■□□□□ 0.16
Trim80Q3V061 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Trim80Q3V061 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim80Q3V061 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim80Q3V061 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim80Q3V061 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim80Q3V061 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim80Q3V061 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim80Q3V061 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim80Q3V061 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.04■□□□□ 0.16
Trim80Q3V061 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim80Q3V061 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim80Q3V061 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim80Q3V061 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Trim80Q3V061 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim80Q3V061 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim80Q3V061 Gm11950-201ENSMUST00000121615 838 ntBASIC16.04■□□□□ 0.16
Trim80Q3V061 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim80Q3V061 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.04■□□□□ 0.16
Trim80Q3V061 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim80Q3V061 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trim80Q3V061 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim80Q3V061 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim80Q3V061 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim80Q3V061 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim80Q3V061 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trim80Q3V061 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim80Q3V061 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim80Q3V061 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Trim80Q3V061 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim80Q3V061 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim80Q3V061 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.04■□□□□ 0.16
Trim80Q3V061 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim80Q3V061 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim80Q3V061 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim80Q3V061 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim80Q3V061 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim80Q3V061 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim80Q3V061 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.03■□□□□ 0.16
Trim80Q3V061 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim80Q3V061 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim80Q3V061 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.03■□□□□ 0.16
Trim80Q3V061 Gm27357-201ENSMUST00000183754 135 ntBASIC16.03■□□□□ 0.16
Trim80Q3V061 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim80Q3V061 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim80Q3V061 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim80Q3V061 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim80Q3V061 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim80Q3V061 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim80Q3V061 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim80Q3V061 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trim80Q3V061 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim80Q3V061 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim80Q3V061 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.03■□□□□ 0.16
Trim80Q3V061 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim80Q3V061 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim80Q3V061 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim80Q3V061 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim80Q3V061 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trim80Q3V061 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trim80Q3V061 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim80Q3V061 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim80Q3V061 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.02■□□□□ 0.16
Trim80Q3V061 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim80Q3V061 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim80Q3V061 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim80Q3V061 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim80Q3V061 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim80Q3V061 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim80Q3V061 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.02■□□□□ 0.16
Trim80Q3V061 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trim80Q3V061 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.02■□□□□ 0.16
Trim80Q3V061 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim80Q3V061 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Trim80Q3V061 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.02■□□□□ 0.15
Trim80Q3V061 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.02■□□□□ 0.15
Trim80Q3V061 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Trim80Q3V061 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim80Q3V061 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.02■□□□□ 0.15
Trim80Q3V061 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trim80Q3V061 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.02■□□□□ 0.15
Trim80Q3V061 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim80Q3V061 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim80Q3V061 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim80Q3V061 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim80Q3V061 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim80Q3V061 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim80Q3V061 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim80Q3V061 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim80Q3V061 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim80Q3V061 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim80Q3V061 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim80Q3V061 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim80Q3V061 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.01■□□□□ 0.15
Trim80Q3V061 Gm26039-201ENSMUST00000158152 144 ntBASIC16.01■□□□□ 0.15
Trim80Q3V061 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms