Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Gm37019-201ENSMUST00000192133 2134 ntBASIC19.78■□□□□ 0.76
Ccdc27Q3V036 BC037039-201ENSMUST00000192003 2205 ntBASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc27Q3V036 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Gm25016-201ENSMUST00000158399 131 ntBASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Gm6345-202ENSMUST00000180900 204 ntBASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc27Q3V036 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc27Q3V036 Sorbs3-204ENSMUST00000227929 2460 ntBASIC19.77■□□□□ 0.75
Ccdc27Q3V036 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Ccdc27Q3V036 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Ccdc27Q3V036 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc27Q3V036 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Gm43697-201ENSMUST00000199637 2581 ntBASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc27Q3V036 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.75■□□□□ 0.75
Ccdc27Q3V036 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Ccdc27Q3V036 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms