Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf223Q3UV31 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf223Q3UV31 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf223Q3UV31 H2af-ps-201ENSMUST00000119066 295 ntBASIC15□□□□□ -0.01
Rnf223Q3UV31 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf223Q3UV31 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
Rnf223Q3UV31 Gm10499-201ENSMUST00000174094 934 ntBASIC15□□□□□ -0.01
Rnf223Q3UV31 Gm27702-201ENSMUST00000184512 56 ntBASIC15□□□□□ -0.01
Rnf223Q3UV31 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rnf223Q3UV31 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Rnf223Q3UV31 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf223Q3UV31 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Rnf223Q3UV31 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf223Q3UV31 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf223Q3UV31 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15□□□□□ -0.01
Rnf223Q3UV31 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf223Q3UV31 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf223Q3UV31 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf223Q3UV31 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf223Q3UV31 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf223Q3UV31 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf223Q3UV31 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf223Q3UV31 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Rnf223Q3UV31 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf223Q3UV31 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rnf223Q3UV31 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rnf223Q3UV31 Gm14822-201ENSMUST00000122247 291 ntBASIC14.98□□□□□ -0.01
Rnf223Q3UV31 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.98□□□□□ -0.01
Rnf223Q3UV31 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.98□□□□□ -0.01
Rnf223Q3UV31 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
Rnf223Q3UV31 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf223Q3UV31 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Rnf223Q3UV31 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf223Q3UV31 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.98□□□□□ -0.01
Rnf223Q3UV31 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.98□□□□□ -0.01
Rnf223Q3UV31 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf223Q3UV31 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf223Q3UV31 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rnf223Q3UV31 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.98□□□□□ -0.01
Rnf223Q3UV31 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Gm24513-201ENSMUST00000174964 138 ntBASIC14.97□□□□□ -0.01
Rnf223Q3UV31 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf223Q3UV31 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf223Q3UV31 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf223Q3UV31 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.96□□□□□ -0.01
Rnf223Q3UV31 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf223Q3UV31 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf223Q3UV31 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf223Q3UV31 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rnf223Q3UV31 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.96□□□□□ -0.01
Rnf223Q3UV31 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf223Q3UV31 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms