Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Znf48Q3US17 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Znf48Q3US17 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Gm15467-201ENSMUST00000120582 445 ntBASIC12.82□□□□□ -0.36
Znf48Q3US17 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.82□□□□□ -0.36
Znf48Q3US17 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.82□□□□□ -0.36
Znf48Q3US17 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Znf48Q3US17 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Znf48Q3US17 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Znf48Q3US17 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Znf48Q3US17 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.82□□□□□ -0.36
Znf48Q3US17 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Znf48Q3US17 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Znf48Q3US17 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Znf48Q3US17 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.82□□□□□ -0.36
Znf48Q3US17 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Znf48Q3US17 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Znf48Q3US17 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Znf48Q3US17 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.81□□□□□ -0.36
Znf48Q3US17 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.81□□□□□ -0.36
Znf48Q3US17 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Mir5126-201ENSMUST00000175513 77 ntBASIC12.81□□□□□ -0.36
Znf48Q3US17 Gm18515-201ENSMUST00000219755 797 ntBASIC12.81□□□□□ -0.36
Znf48Q3US17 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.81□□□□□ -0.36
Znf48Q3US17 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Znf48Q3US17 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.81□□□□□ -0.36
Znf48Q3US17 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.81□□□□□ -0.36
Znf48Q3US17 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Znf48Q3US17 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Znf48Q3US17 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Znf48Q3US17 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Znf48Q3US17 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Znf48Q3US17 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Znf48Q3US17 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Znf48Q3US17 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Znf48Q3US17 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Znf48Q3US17 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Znf48Q3US17 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Znf48Q3US17 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.8□□□□□ -0.36
Znf48Q3US17 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Znf48Q3US17 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Znf48Q3US17 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Znf48Q3US17 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Znf48Q3US17 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Znf48Q3US17 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Znf48Q3US17 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Znf48Q3US17 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Znf48Q3US17 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Znf48Q3US17 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
Znf48Q3US17 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Znf48Q3US17 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms