Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Arhgef40Q3UPH7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Arhgef40Q3UPH7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Arhgef40Q3UPH7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Arhgef40Q3UPH7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Arhgef40Q3UPH7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
Arhgef40Q3UPH7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
Arhgef40Q3UPH7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC22.56■■□□□ 1.2
Arhgef40Q3UPH7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Arhgef40Q3UPH7 Gm7653-201ENSMUST00000214567 508 ntBASIC22.56■■□□□ 1.2
Arhgef40Q3UPH7 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Arhgef40Q3UPH7 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Arhgef40Q3UPH7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Arhgef40Q3UPH7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Arhgef40Q3UPH7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Arhgef40Q3UPH7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC22.55■■□□□ 1.2
Arhgef40Q3UPH7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Arhgef40Q3UPH7 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Arhgef40Q3UPH7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC22.55■■□□□ 1.2
Arhgef40Q3UPH7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Arhgef40Q3UPH7 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Arhgef40Q3UPH7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Arhgef40Q3UPH7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Arhgef40Q3UPH7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Arhgef40Q3UPH7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Arhgef40Q3UPH7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Arhgef40Q3UPH7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC22.54■■□□□ 1.2
Arhgef40Q3UPH7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Arhgef40Q3UPH7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Arhgef40Q3UPH7 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Arhgef40Q3UPH7 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC22.54■■□□□ 1.2
Arhgef40Q3UPH7 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC22.54■■□□□ 1.2
Arhgef40Q3UPH7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Arhgef40Q3UPH7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
Arhgef40Q3UPH7 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Arhgef40Q3UPH7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Arhgef40Q3UPH7 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Arhgef40Q3UPH7 Gm11543-201ENSMUST00000120758 370 ntBASIC22.53■■□□□ 1.2
Arhgef40Q3UPH7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC22.53■■□□□ 1.2
Arhgef40Q3UPH7 Mir7684-201ENSMUST00000183858 60 ntBASIC22.53■■□□□ 1.2
Arhgef40Q3UPH7 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Arhgef40Q3UPH7 AC130829.1-201ENSMUST00000221548 494 ntBASIC22.53■■□□□ 1.2
Arhgef40Q3UPH7 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
Arhgef40Q3UPH7 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Arhgef40Q3UPH7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Arhgef40Q3UPH7 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Arhgef40Q3UPH7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Arhgef40Q3UPH7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Arhgef40Q3UPH7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC22.52■■□□□ 1.2
Arhgef40Q3UPH7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Arhgef40Q3UPH7 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Arhgef40Q3UPH7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Arhgef40Q3UPH7 Gm18766-201ENSMUST00000189811 808 ntBASIC22.52■■□□□ 1.2
Arhgef40Q3UPH7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC22.52■■□□□ 1.2
Arhgef40Q3UPH7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC22.52■■□□□ 1.2
Arhgef40Q3UPH7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC22.52■■□□□ 1.2
Arhgef40Q3UPH7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Arhgef40Q3UPH7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Arhgef40Q3UPH7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Arhgef40Q3UPH7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Arhgef40Q3UPH7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Arhgef40Q3UPH7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Arhgef40Q3UPH7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Arhgef40Q3UPH7 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Arhgef40Q3UPH7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Arhgef40Q3UPH7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Arhgef40Q3UPH7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Arhgef40Q3UPH7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Arhgef40Q3UPH7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC22.52■■□□□ 1.19
Arhgef40Q3UPH7 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
Arhgef40Q3UPH7 Gm27680-201ENSMUST00000184192 160 ntBASIC22.52■■□□□ 1.19
Arhgef40Q3UPH7 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
Arhgef40Q3UPH7 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
Arhgef40Q3UPH7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
Arhgef40Q3UPH7 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Arhgef40Q3UPH7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Arhgef40Q3UPH7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Arhgef40Q3UPH7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Arhgef40Q3UPH7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Arhgef40Q3UPH7 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Arhgef40Q3UPH7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
Arhgef40Q3UPH7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Arhgef40Q3UPH7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC22.51■■□□□ 1.19
Arhgef40Q3UPH7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Arhgef40Q3UPH7 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Arhgef40Q3UPH7 Gm13453-201ENSMUST00000118708 357 ntBASIC22.51■■□□□ 1.19
Arhgef40Q3UPH7 Gm17837-201ENSMUST00000186435 985 ntBASIC22.51■■□□□ 1.19
Arhgef40Q3UPH7 Gm6888-201ENSMUST00000221983 706 ntBASIC22.51■■□□□ 1.19
Arhgef40Q3UPH7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Arhgef40Q3UPH7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Arhgef40Q3UPH7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Arhgef40Q3UPH7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Arhgef40Q3UPH7 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Arhgef40Q3UPH7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Arhgef40Q3UPH7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Arhgef40Q3UPH7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Arhgef40Q3UPH7 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Arhgef40Q3UPH7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Arhgef40Q3UPH7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Arhgef40Q3UPH7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms