Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1brtQ3UNC9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cks1brtQ3UNC9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cks1brtQ3UNC9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.21□□□□□ -0.62
Cks1brtQ3UNC9 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cks1brtQ3UNC9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.21□□□□□ -0.62
Cks1brtQ3UNC9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cks1brtQ3UNC9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.21□□□□□ -0.62
Cks1brtQ3UNC9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Cks1brtQ3UNC9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.21□□□□□ -0.62
Cks1brtQ3UNC9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.21□□□□□ -0.62
Cks1brtQ3UNC9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cks1brtQ3UNC9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cks1brtQ3UNC9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Cks1brtQ3UNC9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Cks1brtQ3UNC9 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Gm27000-201ENSMUST00000182943 842 ntBASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1brtQ3UNC9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Gm43034-201ENSMUST00000198678 1364 ntBASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Gm7291-201ENSMUST00000199147 382 ntBASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Gm10138-203ENSMUST00000206952 366 ntBASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Gm4974-201ENSMUST00000209974 875 ntBASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms