Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Naf1Q3UMQ8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Naf1Q3UMQ8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Naf1Q3UMQ8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Gm13597-201ENSMUST00000121239 375 ntBASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Naf1Q3UMQ8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.73■□□□□ 0.11
Naf1Q3UMQ8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Naf1Q3UMQ8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms