Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm6180-201ENSMUST00000065243 498 ntBASIC19.94■□□□□ 0.78
Sf3b2Q3UJB0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Sf3b2Q3UJB0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sf3b2Q3UJB0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sf3b2Q3UJB0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Sf3b2Q3UJB0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.94■□□□□ 0.78
Sf3b2Q3UJB0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Gm18766-201ENSMUST00000189811 808 ntBASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Gm37748-201ENSMUST00000194379 1140 ntBASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Gm44719-201ENSMUST00000206404 149 ntBASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sf3b2Q3UJB0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Gm15483-201ENSMUST00000120338 456 ntBASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Gm16026-204ENSMUST00000162652 683 ntBASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Gm8602-201ENSMUST00000184045 607 ntBASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.92■□□□□ 0.78
Sf3b2Q3UJB0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b2Q3UJB0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b2Q3UJB0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b2Q3UJB0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b2Q3UJB0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b2Q3UJB0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b2Q3UJB0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b2Q3UJB0 Gm12138-201ENSMUST00000122180 951 ntBASIC19.91■□□□□ 0.78
Sf3b2Q3UJB0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b2Q3UJB0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b2Q3UJB0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b2Q3UJB0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b2Q3UJB0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b2Q3UJB0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b2Q3UJB0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b2Q3UJB0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b2Q3UJB0 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Sf3b2Q3UJB0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Sf3b2Q3UJB0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3b2Q3UJB0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Sf3b2Q3UJB0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3b2Q3UJB0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.9■□□□□ 0.78
Sf3b2Q3UJB0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC19.9■□□□□ 0.78
Sf3b2Q3UJB0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC19.9■□□□□ 0.78
Sf3b2Q3UJB0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC19.9■□□□□ 0.78
Sf3b2Q3UJB0 Gm24694-201ENSMUST00000180054 110 ntBASIC19.9■□□□□ 0.78
Sf3b2Q3UJB0 Gm27533-201ENSMUST00000183800 152 ntBASIC19.9■□□□□ 0.78
Sf3b2Q3UJB0 Gm27663-201ENSMUST00000184839 110 ntBASIC19.9■□□□□ 0.78
Sf3b2Q3UJB0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC19.9■□□□□ 0.78
Sf3b2Q3UJB0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC19.9■□□□□ 0.78
Sf3b2Q3UJB0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC19.9■□□□□ 0.78
Sf3b2Q3UJB0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3b2Q3UJB0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3b2Q3UJB0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
Sf3b2Q3UJB0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3b2Q3UJB0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3b2Q3UJB0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Sf3b2Q3UJB0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Sf3b2Q3UJB0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3b2Q3UJB0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3b2Q3UJB0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Sf3b2Q3UJB0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3b2Q3UJB0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3b2Q3UJB0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC19.89■□□□□ 0.77
Sf3b2Q3UJB0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC19.89■□□□□ 0.77
Sf3b2Q3UJB0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC19.89■□□□□ 0.77
Sf3b2Q3UJB0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3b2Q3UJB0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3b2Q3UJB0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3b2Q3UJB0 Gm45059-201ENSMUST00000205558 1077 ntBASIC19.89■□□□□ 0.77
Sf3b2Q3UJB0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC19.89■□□□□ 0.77
Sf3b2Q3UJB0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms