Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snx27Q3UHD6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
Snx27Q3UHD6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Snx27Q3UHD6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snx27Q3UHD6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snx27Q3UHD6 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snx27Q3UHD6 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.69■□□□□ 0.26
Snx27Q3UHD6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.69■□□□□ 0.26
Snx27Q3UHD6 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.69■□□□□ 0.26
Snx27Q3UHD6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snx27Q3UHD6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snx27Q3UHD6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Gm12008-201ENSMUST00000117791 755 ntBASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snx27Q3UHD6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snx27Q3UHD6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Gm15427-201ENSMUST00000117288 531 ntBASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Gm27301-201ENSMUST00000184012 127 ntBASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Chchd1-203ENSMUST00000224633 557 ntBASIC16.67■□□□□ 0.26
Snx27Q3UHD6 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Snx27Q3UHD6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx27Q3UHD6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Gm26308-201ENSMUST00000157768 69 ntBASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms