Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Gm6659-201ENSMUST00000174752 547 ntBASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cul4aQ3TCH7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cul4aQ3TCH7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cul4aQ3TCH7 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.27■□□□□ 0.19
Cul4aQ3TCH7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cul4aQ3TCH7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cul4aQ3TCH7 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Cul4aQ3TCH7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cul4aQ3TCH7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Cul4aQ3TCH7 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cul4aQ3TCH7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Gm27742-201ENSMUST00000184667 60 ntBASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Gm19164-201ENSMUST00000210667 640 ntBASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms