Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccbe1Q3MI99 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Gm15375-201ENSMUST00000119510 849 ntBASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccbe1Q3MI99 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccbe1Q3MI99 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccbe1Q3MI99 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccbe1Q3MI99 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccbe1Q3MI99 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccbe1Q3MI99 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccbe1Q3MI99 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccbe1Q3MI99 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccbe1Q3MI99 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccbe1Q3MI99 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccbe1Q3MI99 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccbe1Q3MI99 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccbe1Q3MI99 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms