Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Gm9816-201ENSMUST00000122292 1414 ntBASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Gm22323-201ENSMUST00000103832 109 ntBASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Gm7820-201ENSMUST00000121012 1052 ntBASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Gm13050-201ENSMUST00000122149 1345 ntBASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC8.12□□□□□ -1.11
Ush2AQ2QI47 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 n-R5s14-201ENSMUST00000122688 107 ntBASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Gm38341-201ENSMUST00000195357 515 ntBASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Gm9333-201ENSMUST00000205452 1323 ntBASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Cts7-204ENSMUST00000225321 1257 ntBASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Gm5354-201ENSMUST00000182417 973 ntBASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Gm9229-201ENSMUST00000222777 126 ntBASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms