Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ptchd3Q0EEE2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Mir770-201ENSMUST00000103252 94 ntBASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Gm11860-201ENSMUST00000122346 1010 ntBASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ptchd3Q0EEE2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ptchd3Q0EEE2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms