Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.3□□□□□ -0.6
Hspg2Q05793 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Hspg2Q05793 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.3□□□□□ -0.6
Hspg2Q05793 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.3□□□□□ -0.6
Hspg2Q05793 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.3□□□□□ -0.6
Hspg2Q05793 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Hspg2Q05793 Gm45668-201ENSMUST00000211271 493 ntBASIC11.3□□□□□ -0.6
Hspg2Q05793 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Hspg2Q05793 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC11.3□□□□□ -0.6
Hspg2Q05793 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.3□□□□□ -0.6
Hspg2Q05793 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.3□□□□□ -0.6
Hspg2Q05793 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.3□□□□□ -0.6
Hspg2Q05793 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Hspg2Q05793 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Hspg2Q05793 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Hspg2Q05793 Gm7488-201ENSMUST00000117148 684 ntBASIC11.3□□□□□ -0.6
Hspg2Q05793 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hspg2Q05793 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Hspg2Q05793 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hspg2Q05793 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.29□□□□□ -0.6
Hspg2Q05793 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Gm11478-201ENSMUST00000117851 599 ntBASIC11.29□□□□□ -0.6
Hspg2Q05793 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Hspg2Q05793 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hspg2Q05793 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.29□□□□□ -0.6
Hspg2Q05793 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.29□□□□□ -0.6
Hspg2Q05793 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.29□□□□□ -0.6
Hspg2Q05793 AY702102-202ENSMUST00000194651 1173 ntBASIC11.29□□□□□ -0.6
Hspg2Q05793 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Gm7775-201ENSMUST00000218871 853 ntBASIC11.29□□□□□ -0.6
Hspg2Q05793 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Hspg2Q05793 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.29□□□□□ -0.6
Hspg2Q05793 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hspg2Q05793 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.29□□□□□ -0.6
Hspg2Q05793 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hspg2Q05793 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.28□□□□□ -0.6
Hspg2Q05793 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hspg2Q05793 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hspg2Q05793 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hspg2Q05793 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hspg2Q05793 Gm5566-201ENSMUST00000116118 459 ntBASIC11.28□□□□□ -0.6
Hspg2Q05793 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hspg2Q05793 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hspg2Q05793 Gm17150-201ENSMUST00000165577 381 ntBASIC11.28□□□□□ -0.6
Hspg2Q05793 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hspg2Q05793 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hspg2Q05793 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hspg2Q05793 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hspg2Q05793 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hspg2Q05793 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hspg2Q05793 Gm18827-201ENSMUST00000188341 790 ntBASIC11.28□□□□□ -0.6
Hspg2Q05793 Gm6888-201ENSMUST00000221983 706 ntBASIC11.28□□□□□ -0.6
Hspg2Q05793 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hspg2Q05793 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hspg2Q05793 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hspg2Q05793 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hspg2Q05793 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hspg2Q05793 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hspg2Q05793 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hspg2Q05793 Gm22189-201ENSMUST00000103822 86 ntBASIC11.27□□□□□ -0.6
Hspg2Q05793 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Hspg2Q05793 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms