Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smn1P97801 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smn1P97801 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smn1P97801 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smn1P97801 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.31□□□□□ -0.28
Smn1P97801 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Smn1P97801 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smn1P97801 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smn1P97801 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.3□□□□□ -0.28
Smn1P97801 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Smn1P97801 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.3□□□□□ -0.28
Smn1P97801 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Smn1P97801 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.3□□□□□ -0.28
Smn1P97801 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.3□□□□□ -0.28
Smn1P97801 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
Smn1P97801 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Gm7889-201ENSMUST00000185591 958 ntBASIC13.3□□□□□ -0.28
Smn1P97801 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Smn1P97801 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.3□□□□□ -0.28
Smn1P97801 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.3□□□□□ -0.28
Smn1P97801 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Smn1P97801 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smn1P97801 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smn1P97801 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smn1P97801 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smn1P97801 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smn1P97801 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smn1P97801 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Smn1P97801 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Smn1P97801 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smn1P97801 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smn1P97801 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.29□□□□□ -0.28
Smn1P97801 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smn1P97801 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smn1P97801 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Smn1P97801 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smn1P97801 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smn1P97801 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.29□□□□□ -0.28
Smn1P97801 Gm45058-201ENSMUST00000205810 766 ntBASIC13.29□□□□□ -0.28
Smn1P97801 Gm18959-201ENSMUST00000208954 655 ntBASIC13.29□□□□□ -0.28
Smn1P97801 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smn1P97801 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.29□□□□□ -0.28
Smn1P97801 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smn1P97801 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smn1P97801 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smn1P97801 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Smn1P97801 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smn1P97801 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smn1P97801 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Smn1P97801 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smn1P97801 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smn1P97801 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smn1P97801 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.28□□□□□ -0.28
Smn1P97801 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smn1P97801 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smn1P97801 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smn1P97801 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smn1P97801 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.28□□□□□ -0.28
Smn1P97801 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.28□□□□□ -0.28
Smn1P97801 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smn1P97801 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.28□□□□□ -0.28
Smn1P97801 Gm27389-201ENSMUST00000183622 195 ntBASIC13.28□□□□□ -0.28
Smn1P97801 Mir6404-201ENSMUST00000183699 94 ntBASIC13.28□□□□□ -0.28
Smn1P97801 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smn1P97801 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smn1P97801 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smn1P97801 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Smn1P97801 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Smn1P97801 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smn1P97801 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smn1P97801 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smn1P97801 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smn1P97801 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smn1P97801 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smn1P97801 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smn1P97801 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms