Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nkx2-3P97334 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Nkx2-3P97334 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx2-3P97334 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx2-3P97334 Gm12017-201ENSMUST00000122453 1003 ntBASIC19.39■□□□□ 0.69
Nkx2-3P97334 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC19.39■□□□□ 0.69
Nkx2-3P97334 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Nkx2-3P97334 Gm27618-201ENSMUST00000183671 60 ntBASIC19.39■□□□□ 0.69
Nkx2-3P97334 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC19.39■□□□□ 0.69
Nkx2-3P97334 CT009510.1-201ENSMUST00000227972 270 ntBASIC19.39■□□□□ 0.69
Nkx2-3P97334 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx2-3P97334 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx2-3P97334 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Nkx2-3P97334 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC19.39■□□□□ 0.69
Nkx2-3P97334 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
Nkx2-3P97334 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx2-3P97334 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx2-3P97334 Gm8096-201ENSMUST00000209921 1591 ntBASIC19.39■□□□□ 0.69
Nkx2-3P97334 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx2-3P97334 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx2-3P97334 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx2-3P97334 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx2-3P97334 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx2-3P97334 Gm25287-201ENSMUST00000103846 110 ntBASIC19.38■□□□□ 0.69
Nkx2-3P97334 Gm22918-201ENSMUST00000103855 110 ntBASIC19.38■□□□□ 0.69
Nkx2-3P97334 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx2-3P97334 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx2-3P97334 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Nkx2-3P97334 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx2-3P97334 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx2-3P97334 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC19.38■□□□□ 0.69
Nkx2-3P97334 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Nkx2-3P97334 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
Nkx2-3P97334 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx2-3P97334 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Nkx2-3P97334 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx2-3P97334 Gm27622-201ENSMUST00000183779 60 ntBASIC19.38■□□□□ 0.69
Nkx2-3P97334 Gm29541-201ENSMUST00000191351 678 ntBASIC19.38■□□□□ 0.69
Nkx2-3P97334 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx2-3P97334 AC124732.2-201ENSMUST00000221977 316 ntBASIC19.38■□□□□ 0.69
Nkx2-3P97334 AC131710.1-201ENSMUST00000228336 990 ntBASIC19.38■□□□□ 0.69
Nkx2-3P97334 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx2-3P97334 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC19.38■□□□□ 0.69
Nkx2-3P97334 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx2-3P97334 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx2-3P97334 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-3P97334 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-3P97334 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-3P97334 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-3P97334 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Nkx2-3P97334 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-3P97334 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC19.37■□□□□ 0.69
Nkx2-3P97334 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-3P97334 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-3P97334 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC19.37■□□□□ 0.69
Nkx2-3P97334 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Nkx2-3P97334 AC126408.1-201ENSMUST00000225184 523 ntBASIC19.37■□□□□ 0.69
Nkx2-3P97334 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-3P97334 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-3P97334 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.37■□□□□ 0.69
Nkx2-3P97334 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-3P97334 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-3P97334 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-3P97334 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-3P97334 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-3P97334 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-3P97334 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC19.36■□□□□ 0.69
Nkx2-3P97334 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.36■□□□□ 0.69
Nkx2-3P97334 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-3P97334 Gm10253-201ENSMUST00000194270 940 ntBASIC19.36■□□□□ 0.69
Nkx2-3P97334 Rbfox2-208ENSMUST00000227930 1218 ntBASIC19.36■□□□□ 0.69
Nkx2-3P97334 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-3P97334 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-3P97334 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-3P97334 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nkx2-3P97334 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-3P97334 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.36■□□□□ 0.69
Nkx2-3P97334 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-3P97334 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-3P97334 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-3P97334 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Nkx2-3P97334 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-3P97334 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-3P97334 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx2-3P97334 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC19.35■□□□□ 0.69
Nkx2-3P97334 Gm13015-201ENSMUST00000118674 204 ntBASIC19.35■□□□□ 0.69
Nkx2-3P97334 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx2-3P97334 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx2-3P97334 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.35■□□□□ 0.69
Nkx2-3P97334 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC19.35■□□□□ 0.69
Nkx2-3P97334 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx2-3P97334 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx2-3P97334 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC19.35■□□□□ 0.69
Nkx2-3P97334 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx2-3P97334 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx2-3P97334 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx2-3P97334 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
Nkx2-3P97334 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC19.34■□□□□ 0.69
Nkx2-3P97334 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-3P97334 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms