Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.84■□□□□ 0.29
Trim43cP86449 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.84■□□□□ 0.29
Trim43cP86449 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43cP86449 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43cP86449 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.84■□□□□ 0.29
Trim43cP86449 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43cP86449 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43cP86449 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43cP86449 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43cP86449 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43cP86449 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43cP86449 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43cP86449 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43cP86449 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43cP86449 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim43cP86449 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim43cP86449 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trim43cP86449 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Trim43cP86449 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trim43cP86449 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim43cP86449 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trim43cP86449 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trim43cP86449 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.83■□□□□ 0.28
Trim43cP86449 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.83■□□□□ 0.28
Trim43cP86449 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43cP86449 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.83■□□□□ 0.28
Trim43cP86449 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Trim43cP86449 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim43cP86449 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43cP86449 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43cP86449 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43cP86449 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43cP86449 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43cP86449 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43cP86449 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43cP86449 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43cP86449 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43cP86449 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43cP86449 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43cP86449 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43cP86449 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43cP86449 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43cP86449 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43cP86449 Gm8318-201ENSMUST00000182954 872 ntBASIC16.82■□□□□ 0.28
Trim43cP86449 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43cP86449 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43cP86449 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43cP86449 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43cP86449 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43cP86449 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43cP86449 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.82■□□□□ 0.28
Trim43cP86449 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43cP86449 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43cP86449 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim43cP86449 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43cP86449 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trim43cP86449 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43cP86449 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43cP86449 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43cP86449 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43cP86449 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43cP86449 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.81■□□□□ 0.28
Trim43cP86449 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trim43cP86449 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim43cP86449 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim43cP86449 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim43cP86449 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43cP86449 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43cP86449 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43cP86449 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43cP86449 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43cP86449 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43cP86449 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43cP86449 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43cP86449 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43cP86449 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43cP86449 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43cP86449 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43cP86449 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43cP86449 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43cP86449 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.8■□□□□ 0.28
Trim43cP86449 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43cP86449 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43cP86449 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Trim43cP86449 Gm13884-201ENSMUST00000118103 829 ntBASIC16.8■□□□□ 0.28
Trim43cP86449 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.8■□□□□ 0.28
Trim43cP86449 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trim43cP86449 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.8■□□□□ 0.28
Trim43cP86449 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trim43cP86449 Gm7230-201ENSMUST00000173026 815 ntBASIC16.8■□□□□ 0.28
Trim43cP86449 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim43cP86449 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.8■□□□□ 0.28
Trim43cP86449 Gm5864-201ENSMUST00000202263 970 ntBASIC16.8■□□□□ 0.28
Trim43cP86449 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.8■□□□□ 0.28
Trim43cP86449 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43cP86449 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trim43cP86449 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43cP86449 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43cP86449 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43cP86449 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms