Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SgcbP82349 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SgcbP82349 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.8□□□□□ -0.2
SgcbP82349 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SgcbP82349 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
SgcbP82349 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.8□□□□□ -0.2
SgcbP82349 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SgcbP82349 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.8□□□□□ -0.2
SgcbP82349 Gm27646-201ENSMUST00000183989 110 ntBASIC13.8□□□□□ -0.2
SgcbP82349 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.8□□□□□ -0.2
SgcbP82349 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.8□□□□□ -0.2
SgcbP82349 Gm44771-201ENSMUST00000206975 626 ntBASIC13.8□□□□□ -0.2
SgcbP82349 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
SgcbP82349 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.8□□□□□ -0.2
SgcbP82349 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.8□□□□□ -0.2
SgcbP82349 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
SgcbP82349 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SgcbP82349 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SgcbP82349 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SgcbP82349 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SgcbP82349 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.79□□□□□ -0.2
SgcbP82349 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.79□□□□□ -0.2
SgcbP82349 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.79□□□□□ -0.2
SgcbP82349 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.79□□□□□ -0.2
SgcbP82349 AV026068-213ENSMUST00000223675 1171 ntBASIC13.79□□□□□ -0.2
SgcbP82349 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SgcbP82349 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Sybu-209ENSMUST00000228639 4113 ntBASIC13.79□□□□□ -0.2
SgcbP82349 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
SgcbP82349 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SgcbP82349 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
SgcbP82349 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
SgcbP82349 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SgcbP82349 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.78□□□□□ -0.2
SgcbP82349 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC13.78□□□□□ -0.2
SgcbP82349 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.78□□□□□ -0.2
SgcbP82349 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SgcbP82349 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms