Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otx1P80205 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otx1P80205 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otx1P80205 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Otx1P80205 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otx1P80205 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otx1P80205 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otx1P80205 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otx1P80205 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otx1P80205 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Otx1P80205 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otx1P80205 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otx1P80205 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otx1P80205 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otx1P80205 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otx1P80205 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otx1P80205 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otx1P80205 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.32□□□□□ -0.28
Otx1P80205 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Otx1P80205 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otx1P80205 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.32□□□□□ -0.28
Otx1P80205 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Otx1P80205 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Otx1P80205 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.32□□□□□ -0.28
Otx1P80205 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Otx1P80205 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otx1P80205 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otx1P80205 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otx1P80205 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Otx1P80205 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otx1P80205 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Otx1P80205 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Otx1P80205 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otx1P80205 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otx1P80205 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otx1P80205 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otx1P80205 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Otx1P80205 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Otx1P80205 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.31□□□□□ -0.28
Otx1P80205 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otx1P80205 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otx1P80205 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otx1P80205 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Otx1P80205 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otx1P80205 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Otx1P80205 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.31□□□□□ -0.28
Otx1P80205 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otx1P80205 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.31□□□□□ -0.28
Otx1P80205 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.31□□□□□ -0.28
Otx1P80205 Gm44357-201ENSMUST00000195897 142 ntBASIC13.31□□□□□ -0.28
Otx1P80205 Gm19658-201ENSMUST00000196231 138 ntBASIC13.31□□□□□ -0.28
Otx1P80205 Gm44367-201ENSMUST00000196836 138 ntBASIC13.31□□□□□ -0.28
Otx1P80205 Gm44350-201ENSMUST00000197197 138 ntBASIC13.31□□□□□ -0.28
Otx1P80205 Gm44390-201ENSMUST00000197533 144 ntBASIC13.31□□□□□ -0.28
Otx1P80205 Gm44313-201ENSMUST00000198018 138 ntBASIC13.31□□□□□ -0.28
Otx1P80205 Gm44486-201ENSMUST00000198508 138 ntBASIC13.31□□□□□ -0.28
Otx1P80205 Gm44314-201ENSMUST00000199263 138 ntBASIC13.31□□□□□ -0.28
Otx1P80205 Gm44394-201ENSMUST00000199558 138 ntBASIC13.31□□□□□ -0.28
Otx1P80205 Gm44484-201ENSMUST00000199873 138 ntBASIC13.31□□□□□ -0.28
Otx1P80205 Gm44466-201ENSMUST00000200264 138 ntBASIC13.31□□□□□ -0.28
Otx1P80205 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.31□□□□□ -0.28
Otx1P80205 Gm44359-201ENSMUST00000200671 138 ntBASIC13.31□□□□□ -0.28
Otx1P80205 Gm6443-201ENSMUST00000203599 874 ntBASIC13.31□□□□□ -0.28
Otx1P80205 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Otx1P80205 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otx1P80205 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otx1P80205 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otx1P80205 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Otx1P80205 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Otx1P80205 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otx1P80205 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otx1P80205 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otx1P80205 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Otx1P80205 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otx1P80205 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Otx1P80205 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Otx1P80205 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otx1P80205 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.3□□□□□ -0.28
Otx1P80205 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.3□□□□□ -0.28
Otx1P80205 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otx1P80205 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otx1P80205 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otx1P80205 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otx1P80205 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otx1P80205 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otx1P80205 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otx1P80205 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otx1P80205 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.3□□□□□ -0.28
Otx1P80205 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.3□□□□□ -0.28
Otx1P80205 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Otx1P80205 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.3□□□□□ -0.28
Otx1P80205 Gm27646-201ENSMUST00000183989 110 ntBASIC13.3□□□□□ -0.28
Otx1P80205 Gm43514-201ENSMUST00000198852 424 ntBASIC13.3□□□□□ -0.28
Otx1P80205 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Otx1P80205 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otx1P80205 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otx1P80205 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otx1P80205 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otx1P80205 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Otx1P80205 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms