Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.76■□□□□ 0.27
CiitaP79621 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CiitaP79621 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CiitaP79621 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CiitaP79621 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.76■□□□□ 0.27
CiitaP79621 Gm17968-201ENSMUST00000194902 784 ntBASIC16.76■□□□□ 0.27
CiitaP79621 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.76■□□□□ 0.27
CiitaP79621 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CiitaP79621 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.76■□□□□ 0.27
CiitaP79621 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CiitaP79621 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CiitaP79621 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CiitaP79621 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CiitaP79621 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CiitaP79621 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CiitaP79621 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CiitaP79621 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CiitaP79621 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.76■□□□□ 0.27
CiitaP79621 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CiitaP79621 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CiitaP79621 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CiitaP79621 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CiitaP79621 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CiitaP79621 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CiitaP79621 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CiitaP79621 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CiitaP79621 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CiitaP79621 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.75■□□□□ 0.27
CiitaP79621 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.75■□□□□ 0.27
CiitaP79621 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
CiitaP79621 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CiitaP79621 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CiitaP79621 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CiitaP79621 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CiitaP79621 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CiitaP79621 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CiitaP79621 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CiitaP79621 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CiitaP79621 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CiitaP79621 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CiitaP79621 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.74■□□□□ 0.27
CiitaP79621 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.74■□□□□ 0.27
CiitaP79621 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.74■□□□□ 0.27
CiitaP79621 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Gm18246-201ENSMUST00000221023 728 ntBASIC16.74■□□□□ 0.27
CiitaP79621 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Gm5867-201ENSMUST00000063197 592 ntBASIC16.74■□□□□ 0.27
CiitaP79621 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CiitaP79621 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.74■□□□□ 0.27
CiitaP79621 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CiitaP79621 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CiitaP79621 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CiitaP79621 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.73■□□□□ 0.27
CiitaP79621 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CiitaP79621 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CiitaP79621 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CiitaP79621 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CiitaP79621 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CiitaP79621 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CiitaP79621 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.73■□□□□ 0.27
CiitaP79621 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.73■□□□□ 0.27
CiitaP79621 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CiitaP79621 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.73■□□□□ 0.27
CiitaP79621 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.73■□□□□ 0.27
CiitaP79621 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CiitaP79621 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CiitaP79621 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CiitaP79621 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CiitaP79621 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CiitaP79621 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CiitaP79621 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CiitaP79621 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CiitaP79621 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CiitaP79621 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CiitaP79621 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CiitaP79621 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CiitaP79621 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CiitaP79621 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CiitaP79621 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CiitaP79621 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CiitaP79621 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CiitaP79621 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms