Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim4P70271 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.9□□□□□ -0.34
Pdlim4P70271 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim4P70271 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.9□□□□□ -0.34
Pdlim4P70271 Sybu-209ENSMUST00000228639 4113 ntBASIC12.9□□□□□ -0.34
Pdlim4P70271 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pdlim4P70271 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim4P70271 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pdlim4P70271 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.9□□□□□ -0.34
Pdlim4P70271 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Pdlim4P70271 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.9□□□□□ -0.34
Pdlim4P70271 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim4P70271 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim4P70271 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Pdlim4P70271 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.9□□□□□ -0.34
Pdlim4P70271 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.9□□□□□ -0.34
Pdlim4P70271 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.9□□□□□ -0.34
Pdlim4P70271 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.9□□□□□ -0.34
Pdlim4P70271 Gm8655-201ENSMUST00000221159 852 ntBASIC12.9□□□□□ -0.34
Pdlim4P70271 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim4P70271 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim4P70271 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pdlim4P70271 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim4P70271 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim4P70271 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim4P70271 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim4P70271 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pdlim4P70271 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.9□□□□□ -0.35
Pdlim4P70271 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pdlim4P70271 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Pdlim4P70271 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pdlim4P70271 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Pdlim4P70271 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim4P70271 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim4P70271 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim4P70271 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim4P70271 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim4P70271 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim4P70271 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Pdlim4P70271 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim4P70271 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim4P70271 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.89□□□□□ -0.35
Pdlim4P70271 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.89□□□□□ -0.35
Pdlim4P70271 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim4P70271 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Pdlim4P70271 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.89□□□□□ -0.35
Pdlim4P70271 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim4P70271 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pdlim4P70271 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim4P70271 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim4P70271 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim4P70271 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim4P70271 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim4P70271 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim4P70271 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim4P70271 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim4P70271 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim4P70271 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pdlim4P70271 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Pdlim4P70271 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pdlim4P70271 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.88□□□□□ -0.35
Pdlim4P70271 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.88□□□□□ -0.35
Pdlim4P70271 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.88□□□□□ -0.35
Pdlim4P70271 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pdlim4P70271 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pdlim4P70271 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.88□□□□□ -0.35
Pdlim4P70271 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.88□□□□□ -0.35
Pdlim4P70271 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Pdlim4P70271 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pdlim4P70271 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pdlim4P70271 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim4P70271 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms