Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.48□□□□□ -0.41
Lmo4P61969 Gm44335-201ENSMUST00000196879 141 ntBASIC12.48□□□□□ -0.41
Lmo4P61969 Gm44297-201ENSMUST00000198304 141 ntBASIC12.48□□□□□ -0.41
Lmo4P61969 Gm44346-201ENSMUST00000198851 141 ntBASIC12.48□□□□□ -0.41
Lmo4P61969 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.48□□□□□ -0.41
Lmo4P61969 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.48□□□□□ -0.41
Lmo4P61969 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.48□□□□□ -0.41
Lmo4P61969 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.48□□□□□ -0.41
Lmo4P61969 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.48□□□□□ -0.41
Lmo4P61969 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Lmo4P61969 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Lmo4P61969 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Lmo4P61969 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.48□□□□□ -0.41
Lmo4P61969 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lmo4P61969 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Lmo4P61969 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.47□□□□□ -0.41
Lmo4P61969 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Lmo4P61969 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.47□□□□□ -0.41
Lmo4P61969 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.47□□□□□ -0.41
Lmo4P61969 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.47□□□□□ -0.41
Lmo4P61969 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Lmo4P61969 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Lmo4P61969 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Lmo4P61969 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmo4P61969 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmo4P61969 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmo4P61969 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmo4P61969 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmo4P61969 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmo4P61969 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Lmo4P61969 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmo4P61969 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.46□□□□□ -0.41
Lmo4P61969 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Lmo4P61969 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.46□□□□□ -0.41
Lmo4P61969 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.46□□□□□ -0.41
Lmo4P61969 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.46□□□□□ -0.41
Lmo4P61969 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.46□□□□□ -0.41
Lmo4P61969 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.46□□□□□ -0.41
Lmo4P61969 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.46□□□□□ -0.41
Lmo4P61969 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.46□□□□□ -0.41
Lmo4P61969 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Lmo4P61969 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.46□□□□□ -0.41
Lmo4P61969 Gm10154-201ENSMUST00000084445 354 ntBASIC12.46□□□□□ -0.41
Lmo4P61969 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lmo4P61969 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lmo4P61969 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Lmo4P61969 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lmo4P61969 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lmo4P61969 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lmo4P61969 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.46□□□□□ -0.42
Lmo4P61969 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lmo4P61969 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.46□□□□□ -0.42
Lmo4P61969 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.46□□□□□ -0.42
Lmo4P61969 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Lmo4P61969 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmo4P61969 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lmo4P61969 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmo4P61969 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmo4P61969 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lmo4P61969 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmo4P61969 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lmo4P61969 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lmo4P61969 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmo4P61969 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmo4P61969 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lmo4P61969 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lmo4P61969 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmo4P61969 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.45□□□□□ -0.42
Lmo4P61969 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.45□□□□□ -0.42
Lmo4P61969 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmo4P61969 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms