Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vbp1P61759 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vbp1P61759 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vbp1P61759 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
Vbp1P61759 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vbp1P61759 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Vbp1P61759 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Gm12085-201ENSMUST00000119263 940 ntBASIC14.1□□□□□ -0.15
Vbp1P61759 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vbp1P61759 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Vbp1P61759 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Vbp1P61759 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vbp1P61759 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vbp1P61759 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vbp1P61759 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.09□□□□□ -0.15
Vbp1P61759 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vbp1P61759 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.09□□□□□ -0.15
Vbp1P61759 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Vbp1P61759 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Vbp1P61759 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Vbp1P61759 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vbp1P61759 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vbp1P61759 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vbp1P61759 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Vbp1P61759 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vbp1P61759 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vbp1P61759 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.08□□□□□ -0.16
Vbp1P61759 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Vbp1P61759 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vbp1P61759 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vbp1P61759 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.08□□□□□ -0.16
Vbp1P61759 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.08□□□□□ -0.16
Vbp1P61759 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vbp1P61759 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vbp1P61759 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.08□□□□□ -0.16
Vbp1P61759 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vbp1P61759 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vbp1P61759 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vbp1P61759 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.08□□□□□ -0.16
Vbp1P61759 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vbp1P61759 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vbp1P61759 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vbp1P61759 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vbp1P61759 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.08□□□□□ -0.16
Vbp1P61759 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vbp1P61759 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vbp1P61759 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vbp1P61759 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.07□□□□□ -0.16
Vbp1P61759 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vbp1P61759 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms