Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.68□□□□□ -0.22
Sec61a1P61620 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sec61a1P61620 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Sec61a1P61620 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.67□□□□□ -0.22
Sec61a1P61620 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sec61a1P61620 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Olfr129-201ENSMUST00000122318 993 ntBASIC13.67□□□□□ -0.22
Sec61a1P61620 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.67□□□□□ -0.22
Sec61a1P61620 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.67□□□□□ -0.22
Sec61a1P61620 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sec61a1P61620 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sec61a1P61620 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sec61a1P61620 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Sec61a1P61620 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Sec61a1P61620 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Mir3081-201ENSMUST00000175305 84 ntBASIC13.66□□□□□ -0.22
Sec61a1P61620 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.66□□□□□ -0.22
Sec61a1P61620 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Sec61a1P61620 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Sec61a1P61620 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.66□□□□□ -0.22
Sec61a1P61620 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61a1P61620 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sec61a1P61620 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.65□□□□□ -0.22
Sec61a1P61620 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sec61a1P61620 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.65□□□□□ -0.22
Sec61a1P61620 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Gm15794-201ENSMUST00000120182 631 ntBASIC13.65□□□□□ -0.22
Sec61a1P61620 Gm28033-201ENSMUST00000184224 96 ntBASIC13.65□□□□□ -0.22
Sec61a1P61620 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Sec61a1P61620 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.65□□□□□ -0.22
Sec61a1P61620 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms