Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.08□□□□□ -0.64
Cks1bP61025 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.08□□□□□ -0.64
Cks1bP61025 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cks1bP61025 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Cks1bP61025 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Cks1bP61025 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11.08□□□□□ -0.64
Cks1bP61025 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.08□□□□□ -0.64
Cks1bP61025 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cks1bP61025 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cks1bP61025 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
Cks1bP61025 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cks1bP61025 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1bP61025 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1bP61025 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1bP61025 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1bP61025 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Cks1bP61025 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1bP61025 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1bP61025 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cks1bP61025 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1bP61025 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Cks1bP61025 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cks1bP61025 Gm27000-201ENSMUST00000182943 842 ntBASIC11.07□□□□□ -0.64
Cks1bP61025 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC11.07□□□□□ -0.64
Cks1bP61025 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1bP61025 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1bP61025 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cks1bP61025 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1bP61025 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1bP61025 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Cks1bP61025 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Cks1bP61025 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1bP61025 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cks1bP61025 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1bP61025 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Cks1bP61025 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1bP61025 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1bP61025 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1bP61025 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1bP61025 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cks1bP61025 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC11.06□□□□□ -0.64
Cks1bP61025 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.06□□□□□ -0.64
Cks1bP61025 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.06□□□□□ -0.64
Cks1bP61025 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Gm15378-201ENSMUST00000121894 207 ntBASIC11.06□□□□□ -0.64
Cks1bP61025 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC11.06□□□□□ -0.64
Cks1bP61025 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC11.06□□□□□ -0.64
Cks1bP61025 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Cks1bP61025 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.06□□□□□ -0.64
Cks1bP61025 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC11.06□□□□□ -0.64
Cks1bP61025 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Cks1bP61025 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1bP61025 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms