Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup43P59235 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nup43P59235 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup43P59235 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup43P59235 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup43P59235 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup43P59235 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup43P59235 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup43P59235 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Nup43P59235 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup43P59235 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Nup43P59235 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup43P59235 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup43P59235 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup43P59235 Gm7222-201ENSMUST00000117512 906 ntBASIC14.62□□□□□ -0.07
Nup43P59235 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nup43P59235 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup43P59235 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.62□□□□□ -0.07
Nup43P59235 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nup43P59235 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nup43P59235 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.62□□□□□ -0.07
Nup43P59235 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nup43P59235 Mzt1-203ENSMUST00000227948 952 ntBASIC14.62□□□□□ -0.07
Nup43P59235 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup43P59235 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup43P59235 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup43P59235 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nup43P59235 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup43P59235 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup43P59235 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.62□□□□□ -0.07
Nup43P59235 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup43P59235 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup43P59235 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Nup43P59235 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup43P59235 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Gm14722-201ENSMUST00000118943 689 ntBASIC14.61□□□□□ -0.07
Nup43P59235 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.61□□□□□ -0.07
Nup43P59235 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Nup43P59235 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.61□□□□□ -0.07
Nup43P59235 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.61□□□□□ -0.07
Nup43P59235 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nup43P59235 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Nup43P59235 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup43P59235 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Nup43P59235 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nup43P59235 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nup43P59235 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nup43P59235 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Nup43P59235 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.6□□□□□ -0.07
Nup43P59235 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Gm6550-201ENSMUST00000187574 993 ntBASIC14.6□□□□□ -0.07
Nup43P59235 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.6□□□□□ -0.07
Nup43P59235 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.6□□□□□ -0.07
Nup43P59235 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nup43P59235 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nup43P59235 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nup43P59235 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Nup43P59235 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.6□□□□□ -0.07
Nup43P59235 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup43P59235 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms