Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tpm1P58771 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm1P58771 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tpm1P58771 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm1P58771 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm1P58771 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm1P58771 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Tpm1P58771 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Tpm1P58771 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm1P58771 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm1P58771 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.31■□□□□ 0.36
Tpm1P58771 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm1P58771 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm1P58771 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm1P58771 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm1P58771 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm1P58771 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.31■□□□□ 0.36
Tpm1P58771 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Tpm1P58771 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm1P58771 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.31■□□□□ 0.36
Tpm1P58771 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tpm1P58771 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm1P58771 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm1P58771 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tpm1P58771 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm1P58771 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Tpm1P58771 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.31■□□□□ 0.36
Tpm1P58771 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm1P58771 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tpm1P58771 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.31■□□□□ 0.36
Tpm1P58771 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Tpm1P58771 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.3■□□□□ 0.36
Tpm1P58771 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Tpm1P58771 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Tpm1P58771 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.3■□□□□ 0.36
Tpm1P58771 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tpm1P58771 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm1P58771 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.3■□□□□ 0.36
Tpm1P58771 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm1P58771 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm1P58771 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.3■□□□□ 0.36
Tpm1P58771 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm1P58771 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.3■□□□□ 0.36
Tpm1P58771 Gm10052-201ENSMUST00000168019 960 ntBASIC17.3■□□□□ 0.36
Tpm1P58771 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm1P58771 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.3■□□□□ 0.36
Tpm1P58771 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.3■□□□□ 0.36
Tpm1P58771 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm1P58771 Gm7729-201ENSMUST00000050143 801 ntBASIC17.3■□□□□ 0.36
Tpm1P58771 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.3■□□□□ 0.36
Tpm1P58771 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm1P58771 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm1P58771 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Tpm1P58771 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm1P58771 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm1P58771 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.3■□□□□ 0.36
Tpm1P58771 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm1P58771 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm1P58771 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Tpm1P58771 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm1P58771 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Tpm1P58771 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm1P58771 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm1P58771 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm1P58771 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm1P58771 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm1P58771 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm1P58771 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.29■□□□□ 0.36
Tpm1P58771 Gm29257-201ENSMUST00000186115 639 ntBASIC17.29■□□□□ 0.36
Tpm1P58771 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.29■□□□□ 0.36
Tpm1P58771 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm1P58771 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm1P58771 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm1P58771 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm1P58771 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm1P58771 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm1P58771 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm1P58771 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm1P58771 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm1P58771 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm1P58771 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm1P58771 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm1P58771 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm1P58771 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm1P58771 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm1P58771 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm1P58771 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm1P58771 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm1P58771 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm1P58771 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm1P58771 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Tpm1P58771 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm1P58771 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm1P58771 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Tpm1P58771 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm1P58771 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm1P58771 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm1P58771 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Tpm1P58771 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm1P58771 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms