Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp25P57080 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp25P57080 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp25P57080 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp25P57080 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp25P57080 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp25P57080 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp25P57080 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp25P57080 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp25P57080 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp25P57080 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp25P57080 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Usp25P57080 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp25P57080 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp25P57080 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp25P57080 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Usp25P57080 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp25P57080 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Usp25P57080 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Usp25P57080 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.56■□□□□ 0.4
Usp25P57080 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp25P57080 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp25P57080 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp25P57080 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Usp25P57080 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp25P57080 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp25P57080 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp25P57080 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp25P57080 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp25P57080 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp25P57080 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp25P57080 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.55■□□□□ 0.4
Usp25P57080 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Usp25P57080 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp25P57080 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp25P57080 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp25P57080 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.55■□□□□ 0.4
Usp25P57080 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.55■□□□□ 0.4
Usp25P57080 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp25P57080 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp25P57080 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.55■□□□□ 0.4
Usp25P57080 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.55■□□□□ 0.4
Usp25P57080 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp25P57080 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp25P57080 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp25P57080 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp25P57080 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp25P57080 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp25P57080 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp25P57080 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Usp25P57080 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Usp25P57080 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Usp25P57080 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp25P57080 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp25P57080 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp25P57080 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp25P57080 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Usp25P57080 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp25P57080 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp25P57080 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp25P57080 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp25P57080 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp25P57080 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp25P57080 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp25P57080 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Usp25P57080 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Usp25P57080 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Usp25P57080 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Usp25P57080 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Usp25P57080 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Usp25P57080 Gm37722-201ENSMUST00000193757 208 ntBASIC17.54■□□□□ 0.4
Usp25P57080 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp25P57080 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.54■□□□□ 0.4
Usp25P57080 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.54■□□□□ 0.4
Usp25P57080 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.54■□□□□ 0.4
Usp25P57080 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp25P57080 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp25P57080 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp25P57080 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp25P57080 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp25P57080 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp25P57080 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Usp25P57080 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Usp25P57080 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp25P57080 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp25P57080 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp25P57080 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp25P57080 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp25P57080 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Usp25P57080 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp25P57080 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp25P57080 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Usp25P57080 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp25P57080 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp25P57080 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.53■□□□□ 0.4
Usp25P57080 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp25P57080 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp25P57080 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp25P57080 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp25P57080 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms