Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
Sssca1P56873 Mir6404-201ENSMUST00000183699 94 ntBASIC12.55□□□□□ -0.4
Sssca1P56873 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.55□□□□□ -0.4
Sssca1P56873 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.55□□□□□ -0.4
Sssca1P56873 Gm21559-201ENSMUST00000220638 855 ntBASIC12.55□□□□□ -0.4
Sssca1P56873 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.55□□□□□ -0.4
Sssca1P56873 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.55□□□□□ -0.4
Sssca1P56873 Gm8587-201ENSMUST00000076538 843 ntBASIC12.55□□□□□ -0.4
Sssca1P56873 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.55□□□□□ -0.4
Sssca1P56873 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sssca1P56873 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sssca1P56873 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Sssca1P56873 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.54□□□□□ -0.4
Sssca1P56873 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.54□□□□□ -0.4
Sssca1P56873 Gm11355-201ENSMUST00000121120 306 ntBASIC12.54□□□□□ -0.4
Sssca1P56873 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.54□□□□□ -0.4
Sssca1P56873 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.54□□□□□ -0.4
Sssca1P56873 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.54□□□□□ -0.4
Sssca1P56873 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sssca1P56873 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sssca1P56873 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sssca1P56873 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sssca1P56873 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.53□□□□□ -0.4
Sssca1P56873 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sssca1P56873 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sssca1P56873 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sssca1P56873 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Sssca1P56873 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sssca1P56873 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sssca1P56873 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sssca1P56873 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.53□□□□□ -0.4
Sssca1P56873 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sssca1P56873 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sssca1P56873 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.53□□□□□ -0.4
Sssca1P56873 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.53□□□□□ -0.4
Sssca1P56873 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sssca1P56873 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sssca1P56873 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sssca1P56873 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sssca1P56873 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sssca1P56873 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sssca1P56873 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sssca1P56873 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sssca1P56873 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Sssca1P56873 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sssca1P56873 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sssca1P56873 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sssca1P56873 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sssca1P56873 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sssca1P56873 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sssca1P56873 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sssca1P56873 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sssca1P56873 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sssca1P56873 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sssca1P56873 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sssca1P56873 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sssca1P56873 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sssca1P56873 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.52□□□□□ -0.41
Sssca1P56873 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sssca1P56873 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sssca1P56873 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sssca1P56873 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sssca1P56873 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sssca1P56873 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sssca1P56873 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sssca1P56873 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sssca1P56873 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms