Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh11P55288 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh11P55288 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.15□□□□□ -0.14
Cdh11P55288 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cdh11P55288 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.15□□□□□ -0.14
Cdh11P55288 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdh11P55288 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh11P55288 Gm7461-201ENSMUST00000058918 827 ntBASIC14.15□□□□□ -0.14
Cdh11P55288 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh11P55288 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cdh11P55288 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh11P55288 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh11P55288 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh11P55288 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh11P55288 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdh11P55288 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh11P55288 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Cdh11P55288 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cdh11P55288 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdh11P55288 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cdh11P55288 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.14□□□□□ -0.15
Cdh11P55288 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdh11P55288 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cdh11P55288 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdh11P55288 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cdh11P55288 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdh11P55288 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.14□□□□□ -0.15
Cdh11P55288 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdh11P55288 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdh11P55288 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh11P55288 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cdh11P55288 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Cdh11P55288 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh11P55288 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh11P55288 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh11P55288 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.13□□□□□ -0.15
Cdh11P55288 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh11P55288 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh11P55288 Gm24589-201ENSMUST00000116692 94 ntBASIC14.13□□□□□ -0.15
Cdh11P55288 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh11P55288 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Cdh11P55288 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdh11P55288 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.13□□□□□ -0.15
Cdh11P55288 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh11P55288 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh11P55288 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh11P55288 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh11P55288 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.13□□□□□ -0.15
Cdh11P55288 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh11P55288 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh11P55288 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Cdh11P55288 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh11P55288 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Cdh11P55288 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.13□□□□□ -0.15
Cdh11P55288 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh11P55288 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh11P55288 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh11P55288 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh11P55288 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdh11P55288 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh11P55288 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh11P55288 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh11P55288 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh11P55288 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh11P55288 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh11P55288 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh11P55288 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.12□□□□□ -0.15
Cdh11P55288 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdh11P55288 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh11P55288 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.12□□□□□ -0.15
Cdh11P55288 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh11P55288 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
Cdh11P55288 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh11P55288 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh11P55288 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh11P55288 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh11P55288 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh11P55288 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh11P55288 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms