Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh6P54276 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh6P54276 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh6P54276 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh6P54276 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh6P54276 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh6P54276 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh6P54276 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh6P54276 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Msh6P54276 Gm27622-201ENSMUST00000183779 60 ntBASIC19.54■□□□□ 0.72
Msh6P54276 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC19.54■□□□□ 0.72
Msh6P54276 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh6P54276 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Msh6P54276 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Msh6P54276 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Msh6P54276 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh6P54276 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh6P54276 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msh6P54276 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.53■□□□□ 0.72
Msh6P54276 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msh6P54276 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Msh6P54276 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msh6P54276 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msh6P54276 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msh6P54276 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Msh6P54276 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msh6P54276 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Msh6P54276 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.53■□□□□ 0.72
Msh6P54276 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msh6P54276 AC126250.1-201ENSMUST00000228343 1768 ntBASIC19.53■□□□□ 0.72
Msh6P54276 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Msh6P54276 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Msh6P54276 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Msh6P54276 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC19.53■□□□□ 0.72
Msh6P54276 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.53■□□□□ 0.72
Msh6P54276 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Msh6P54276 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msh6P54276 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msh6P54276 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Msh6P54276 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Msh6P54276 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msh6P54276 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Msh6P54276 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
Msh6P54276 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Msh6P54276 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Msh6P54276 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Msh6P54276 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Msh6P54276 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Msh6P54276 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.52■□□□□ 0.72
Msh6P54276 Gm7336-201ENSMUST00000107041 1232 ntBASIC19.52■□□□□ 0.72
Msh6P54276 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Msh6P54276 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Msh6P54276 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Msh6P54276 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.52■□□□□ 0.72
Msh6P54276 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC19.52■□□□□ 0.72
Msh6P54276 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC19.52■□□□□ 0.72
Msh6P54276 Gm10499-201ENSMUST00000174094 934 ntBASIC19.52■□□□□ 0.72
Msh6P54276 Gm10253-201ENSMUST00000194270 940 ntBASIC19.52■□□□□ 0.72
Msh6P54276 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.52■□□□□ 0.72
Msh6P54276 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Msh6P54276 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Msh6P54276 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Msh6P54276 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Msh6P54276 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Msh6P54276 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Msh6P54276 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh6P54276 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh6P54276 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Msh6P54276 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh6P54276 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh6P54276 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Msh6P54276 Dancr-204ENSMUST00000132389 2347 ntBASIC19.51■□□□□ 0.71
Msh6P54276 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh6P54276 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Msh6P54276 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Msh6P54276 App-207ENSMUST00000227737 2827 ntBASIC19.51■□□□□ 0.71
Msh6P54276 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh6P54276 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Msh6P54276 Gm25287-201ENSMUST00000103846 110 ntBASIC19.51■□□□□ 0.71
Msh6P54276 Gm22918-201ENSMUST00000103855 110 ntBASIC19.51■□□□□ 0.71
Msh6P54276 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Msh6P54276 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.51■□□□□ 0.71
Msh6P54276 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.51■□□□□ 0.71
Msh6P54276 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Msh6P54276 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Msh6P54276 Gm7774-201ENSMUST00000200064 533 ntBASIC19.51■□□□□ 0.71
Msh6P54276 Gm18057-201ENSMUST00000208220 503 ntBASIC19.51■□□□□ 0.71
Msh6P54276 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC19.51■□□□□ 0.71
Msh6P54276 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Msh6P54276 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh6P54276 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh6P54276 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh6P54276 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh6P54276 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh6P54276 AC154767.3-201ENSMUST00000225150 1342 ntBASIC19.51■□□□□ 0.71
Msh6P54276 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh6P54276 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh6P54276 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh6P54276 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh6P54276 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms