Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sox1P53783 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.77■□□□□ 0.12
Sox1P53783 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox1P53783 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.77■□□□□ 0.12
Sox1P53783 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.77■□□□□ 0.12
Sox1P53783 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.77■□□□□ 0.12
Sox1P53783 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.77■□□□□ 0.12
Sox1P53783 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sox1P53783 Gm2272-201ENSMUST00000194903 582 ntBASIC15.77■□□□□ 0.12
Sox1P53783 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.77■□□□□ 0.12
Sox1P53783 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.77■□□□□ 0.12
Sox1P53783 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.77■□□□□ 0.12
Sox1P53783 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox1P53783 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox1P53783 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.77■□□□□ 0.12
Sox1P53783 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox1P53783 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox1P53783 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox1P53783 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Sox1P53783 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox1P53783 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Sox1P53783 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox1P53783 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
Sox1P53783 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Sox1P53783 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox1P53783 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox1P53783 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox1P53783 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Sox1P53783 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox1P53783 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox1P53783 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.76■□□□□ 0.11
Sox1P53783 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Sox1P53783 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox1P53783 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sox1P53783 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox1P53783 Gm27533-201ENSMUST00000183800 152 ntBASIC15.76■□□□□ 0.11
Sox1P53783 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.76■□□□□ 0.11
Sox1P53783 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Sox1P53783 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Sox1P53783 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Sox1P53783 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.76■□□□□ 0.11
Sox1P53783 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox1P53783 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox1P53783 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Sox1P53783 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox1P53783 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox1P53783 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
Sox1P53783 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox1P53783 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox1P53783 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Sox1P53783 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox1P53783 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox1P53783 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox1P53783 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sox1P53783 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox1P53783 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox1P53783 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox1P53783 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox1P53783 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox1P53783 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox1P53783 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox1P53783 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox1P53783 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox1P53783 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox1P53783 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.75■□□□□ 0.11
Sox1P53783 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox1P53783 Gm18766-201ENSMUST00000189811 808 ntBASIC15.75■□□□□ 0.11
Sox1P53783 Gm8969-201ENSMUST00000199694 526 ntBASIC15.75■□□□□ 0.11
Sox1P53783 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.75■□□□□ 0.11
Sox1P53783 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.75■□□□□ 0.11
Sox1P53783 Gm45668-201ENSMUST00000211271 493 ntBASIC15.75■□□□□ 0.11
Sox1P53783 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.75■□□□□ 0.11
Sox1P53783 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox1P53783 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox1P53783 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox1P53783 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox1P53783 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox1P53783 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Sox1P53783 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.74■□□□□ 0.11
Sox1P53783 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Sox1P53783 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.74■□□□□ 0.11
Sox1P53783 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.74■□□□□ 0.11
Sox1P53783 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.74■□□□□ 0.11
Sox1P53783 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.74■□□□□ 0.11
Sox1P53783 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.74■□□□□ 0.11
Sox1P53783 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.74■□□□□ 0.11
Sox1P53783 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox1P53783 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms